How to reconcile Stripe payments
Stripe pays out in batches: one bank line made of many sales, less Stripe's fees, usually covering several days. Bank Reconciler's batch matching only groups book entries dated the same day, so a multi-day payout will not batch on its own. The clean way is a Stripe clearing account: record each payout in the books as a transfer from the clearing account to the bank, and the payout then matches one for one. Then reconcile Stripe's payout report against the clearing account, uploading the report as the "bank" file, with Stripe's fees recorded as an expense. The Merchant Parser button on the upload screen is for marketplace statements: it parses eBay, Amazon and PayPal exports; a Stripe payout report goes straight in as a CSV.